Effect of Gold Nanoparticles Size Capped with Surfactant on the Transformation of Plasmid into Escherichia coli Bacteria

Research Article

Ann Materials Sci Eng. 2021; 5(1): 1041.

Effect of Gold Nanoparticles Size Capped with Surfactant on the Transformation of Plasmid into Escherichia coli Bacteria

Amr D*, Attia N, Seufi A and Galal A

Department of Chemistry, Faculty of Science, Cairo University, Cairo, Egypt

*Corresponding author: Dina Amr, Department of Chemistry, Faculty of Science, Cairo University, Cairo, Egypt

Received: August 16, 2021; Accepted: September 17, 2021; Published: September 24, 2021

Abstract

Bacterial transformation has great importance in molecular biology, as it is used for introduction of foreign genes into bacterial cells either chemical or physical ways. Using calcium chloride to prepare competent cells and heat shock is the most widely used method for bacterial transformation. This method is an efficient and convenient technique but it has in some extent low transformation efficiency. Here we report the use of nanoparticles that significantly improve the transformation efficiency up to 10 times higher than the standard heat shock method by the assistance of (˜ 15, 25 nm) SDS capped gold nanoparticles in the transformation process that leads to the formation of temporary nano-channels across the bacterial cell wall to deliver plasmids into cells. Transformation of bacteria with plasmid was examined using Β-galactosidase assay.

Keywords: Transformation; Escherichia coli; Competent cells; Plasmid; Gold nanoparticles

Introduction

Bacterial transformation steps have focal importance in the latest advancement in molecular biology by construction of recombinant strain. Recombinant plasmids are transformed into various bacterial host cells for replication and expression of exogenous gene, and to meet multiple varieties of research needs and commercial application [1,2]. It can be achieved using either chemical methods such as calcium chloride or physical methods such as electroporation. The drawback of these traditional transformation methods was that large numbers of bacteria was needed to compensate the high percentage of cell death in case of electroporation and in calcium chloride method has in some extent low transformation efficiency [3].

Hanahan’s protocol is the most widely used chemical transformation method that use calcium chloride treatment to make bacterial cell competent [4]. There is limited attention in the use of synthetic inorganic gene nano-carriers in bacterial cell transformation [5]. Using Nanoparticles (NPs), either polymeric or inorganic, was resulted in increasing the transformation yield. Due to its condensation ability that cause DNA enrichment on to the cell surface [6]. It has been reported that non-toxic nanoparticles such as gold NPs, silica NPs, and carbon nanotubes facilitate the entrance of macromolecules into host cells [5,7,8]. Multi-walled carbon nanotubes (CNTs) that dispersed in water were used to target the bacterial surface to deliver plasmid DNA into the cells in the presence of microwave irradiation by developing of temporary nano-channels across the cell envelope [5].

In another study, the transformation efficiency of E. coli competent cells prepared with calcium chloride method was greatly improved by using amino modified silica-nanoparticles (a-SiNPs) as an aiding agent [9]. Also, Fe3O4 nanoparticles were used in plasmid delivery to E. coli competent cells prepared with calcium chloride method and heat shock transformation standard method [10]. Magnetic nanoparticles were used in introduction of exogenous DNA into bacteria in the presence of pulsed magnetic field [11].

Chitosan nanoparticles and chitin nano-whiskers facilitates E. coli transformation and plasmid DNA delivery [12,13]. Specifically, gold nano-particles (Au NPs) are promising tool to use in gene delivery as these particles easily conjugated with biomolecules at a high packing density [14]. Delivering genes to bacteria can be done via electrospray of gold nanoparticles [15]. Gold nanoparticles functionalized with glutathione were used to deliver plasmid DNA into E. coli cells without the need for competent cells preparation [16]. So, the focus of research now is in the development of novel plasmid DNA delivery methods to improve the efficiency of the existing methods. Transformation efficiency improvement had a great importance in shotgun, as every single DNA fragment had a great importance in genomic DNA or complete cDNA library construction. So, if any DNA fragment lost during genome sequencing projects results in decreasing the technique accuracy [10]. Our aim in this study is to determine the effect of using SDS-capped gold nanoparticles of two different sizes (˜ 15, 25 nm) and the effect of changing the sequence of addition of gold nanoparticles through the transformation process on the efficiency of transformation of plasmid into E. coli competent cells prepared by calcium chloride and transformed by heat shock method.

Materials and Methods

Gold (III) chloride trihydrate (≥99.9%) was obtained from Sigma. Escherichia coli bacterial strain (JM109) (endA1 glnV44 thi-1 relA1 gyrA96 recA1 mcrB+ Δ (lac-proAB) e14- [F’ traD36 proAB+ lacIq lacZΔM15] hsdR17 (rK-mK+)), plasmid DNA pGEM®-5Zf (+) and PureYieldTM Plasmid Miniprep Kit were obtained from Promega (USA). All reagents were prepared using ultrahigh pure water from an ultra-pure water system Milli-Q Plus (Millipore Co.).

Synthesis of SDS capped gold nanoparticles

SDS coated gold nanoparticles were prepared as previously reported procedure [17] (for more information see supplementary file section 1.1). The molar concentration of nanoparticle dispersion and nanoparticles number in it was calculated by using previous reported calculations [18,19] (for more information see supplementary file section 1.2, 1.3).

Competent cell preparation and transformation procedure

Competent cells E. coli cell (JM109) were prepared following “calcium chloride standard protocol” [1]. Transformation of plasmid DNA (pGEM®-5Zf (+) was applied in this study) into bacterial cells using nanoparticles was done by two different nanoparticles administration routes that differs on the sequence of addition of nanoparticles through the transformation process.

In the first nanoparticles administration route: before transformation, 1μL of the prepared nano-particles dispersed in deionized water (concentration ˜ 10-9 M, ˜ 108 NPs) was mixed with 5μL plasmid DNA (2ng/μL) and allow the mixture to place on ice for 10min as to allow DNA/nanoparticles interaction and formation of nanoparticle/DNA complex. Then, this nanoparticle/DNA complex added on 100μL competent cells (˜ 2.92 × 108 cells) then follow heat shock standard transformation protocol [1]. While, in the second nanoparticles administration route was done as the following, before transformation 1μL of the prepared nanoparticles dispersed in deionized water (concentration ˜ 10-9 M, ˜ 108 NPs) was mixed with 100μL competent cells (˜ 2.92 × 108 cells) and allow the interaction between NPs and competent cells by putting for 10min on ice. After that, follow the standard heat shock transformation protocol [1]. Finally, bacterial transformation efficiency calculated based on counting the numbers of colonies [20,21] (for more information see supplementary file section 2). The success of the transformation process was also confirmed indirectly by preforming Plasmid DNA extraction (PureYieldTM Plasmid Miniprep Kit (Promega kit, USA)) following the manufacturer’s instruction from blue colonies randomly chosen subculture. The extracted plasmid DNA band visualized on 0.8% agarose gel electrophoresis as the standard protocol [22] by gel documentation system (Gel DocTM EZ System, Bio-Rad, USA) (for more information see section 2 in supplementary file).

Characterization by transmission electron microscope (TEM)

TEM sample preparation of either gold nanoparticles or bacterial ultra-thin sections were done following the protocols previously mentioned in literature [23,24] (for more information see section 3 in supplementary file).

Results and Discussion

Preparation and characterization of gold nanoparticles

Gold nanoparticles was prepared based on gold seeds synthesis, and growth of these seeds into larger particles by addition of SDS surfactant, more gold salt and ascorbic acid in small amount which act as weak reducing agent in the growth solution [17]. Transmission electron microscope (JEOL JEM-1400, operated at 80kV) used to determine the actual shape and size of the nanoparticle as shown in Figure 1a and 1b electron micrographs. From TEM images we found that SDS-stabilized gold nanoparticles have average particle diameter size 13 ± 2 nm (Figure 1a) and average particle diameter size 25 ± 2 nm (Figure 1b).