Isolation and Molecular Detection of Lumpy Skin Disease Virus from Outbreak Cases in Illubabor Zone, Oromia Regional State, Ethiopia

Research Article

Austin J Vet Sci & Anim Husb. 2022; 9(1): 1089.

Isolation and Molecular Detection of Lumpy Skin Disease Virus from Outbreak Cases in Illubabor Zone, Oromia Regional State, Ethiopia

Guyassa C¹*, Dilbato T², Aliy A¹, Shegu D¹ and Zewude D¹

¹National Animal Health Diagnostic and Investigation Center, Sebeta, Ethiopia

²Ambo University, College Of Agriculture and Veterinary Science, Ambo, Ethiopia

*Corresponding author: Chala Guyassa, National Animal Health Diagnostic and Investigation Center, Sebeta, Ethiopia

Received: February 17, 2022; Accepted: March 11, 2022; Published: March 18, 2022

Abstract

Background: Lumpy skin disease is one of the most economically important viral diseases of cattle and Asian water buffalo caused by lumpy skin disease virus, which occurs in most African countries including Ethiopia. In Ethiopia, it has been detected in exotic and local breed cattle. To this end, there is scarcity of information on its epidemic status, among cattle in Illubabor, Ethiopia. Therefore, outbreak investigation was conducted to estimate epidemic status of lumpy skin disease among cattle in illubabor zone, Yayo district.

Methodology: Outbreak investigation was done from August to December 2020 in the Ilubabor zone, Yayo district, with the goal of isolating and detecting the virus using molecular methods. All ages and both sexes of local breed cattle from reported disease outbreaks of the study area were subjected to the study. Skin biopsies (n=44) were collected from non-vaccinated lumpy skin disease affected cattle after examining the presence of skin lesions and transported to NAHDIC for laboratory test. Virus was isolated by growing on Vero cells and molecular detection was performed by conventional and real-time polymerase chain reaction.

Results: The characteristic capripoxvirus cytopathic effect was observed on 17 out of 44 Vero cells inoculated. Out of the total 44 samples, 88.63% (39/44) and (95.45%) 42/44 were found positive for LSDV by conventional and real time polymerase chain reaction respectively. Chi-square (x²) test was used to assess the association of sex and ages with affected group. Morbidity, mortality and case fatality rates were 15.49%, 1.4% and 9.09% respectively. Adult cattle showed higher morbidity (17.18%) than young ones (11.1%). Also not statistically significant, higher morbidity was observed in female (16.66%) than male (14.11%) cattle.

Conclusion: The study showed that lumpy skin disease was circulating in cattle in the area and causing great loss to the farmers with high morbidity rates. To reduce economic losses caused by the disease, it was suggested that strategic programs for effective control and prevention be established.

Keywords: Illubabor Zone; Lumpy skin disease virus; Molecular detection; Polymerase chain reaction; Virus isolation

Introduction

Ethiopia has believed to have 124.43 million domestic ruminants; 60.39 million cattle, 31.30 million sheep and 32.74 goats, which was the largest population within the region of Africa. While livestock has historically played a significant role in the country’s economy, the value derived from these animals has been limited due to a variety of factors. Livestock diseases are one of the major roadblocks to the sector’s development, as they reduce productivity and impede commerce in animals and animal products [1,2]. Lumpy skin disease is one of the most common and widespread livestock diseases in all of the country’s regions [3].

A lumpy skin disease, caused by the lumpy skin disease virus, is a serious pox disease that affects cattle and Asian water buffalo (LSDV). It is among of the most economically significant viral diseases identified by the OIE as notifiable transboundary animal diseases, and the second most significant cattle disease in Ethiopia [4,5]. It is because of its economic significance that the disease listed on the OIE’s list of notifiable terrestrial animal diseases [6] and causes significant economic losses by reducing milk production, emaciation and poor growth in infected animals, permanent damage to hides, abortion, temporary or permanent infertility, and secondary bacterial infections can sometimes result in death [7,8].

LSDV is found under the genus Capripox virus (CaPVs) in the sub-family Chordopoxvirinae of Poxviridae family member. The Poxviridae family is distinguished by its huge and complicated genome, which consists a single, linear molecule of ds DNA that codes for approximately 200 proteins and consists of two subfamilies: Chordopoxvirinae, the vertebrate poxvirus, and Entomopoxvirinae, an insect poxvirus. The genus Capripoxvirus comprises: Lumpy skin disease virus (LSDV) and pox virus of sheep and goat (SPPV and GTPV) [9].

LSDV has limited host range and hence, can complete its replication cycle only in ruminant hosts. The disease mainly affects cattle and cattle of all ages, both sexes and all breeds are affected and is more severe in lactating and pregnant cows [8,10,11]. There is some evidence, however, that young animals are more vulnerable to the severe form of the disease; Bos indicus is less susceptible to clinical disease than Bos taurus, and Asian water buffaloes also have been reported to be susceptible. Despite the fact that LSD has not been reported in goats and sheep, characteristic skin lesions in sheep, goats, giraffes, impalas, and Grant’s gazelles kept in close contact with infected cattle have been established without systemic disease [12-14].

The entry of cattle from the affected region, as well as high temperatures and humidity, are usually linked to an LSDV outbreak in a previously disease-free area [7,15]. The virus must be fully disseminated to sensitive cattle in the nearby farms or surrounds for an outbreak to start and emerge after the initial exposure of sick animals into a new region [16]. It’s more common during the wet summer and autumn months, particularly in low-lying areas or around pools of water, but outbreaks can occur at any time of year [17]. The most major sources of infection to animals are thought to be; blood, nasal discharge, lacrimal secretions, semen and saliva. Mechanical vectors for the disease include blood-feeding insects like mosquitoes and flies [15].

In endemic area, vaccination is the only economically accepted way to control the spread of LSD and improve cattle productivity, because avoiding animal movement and affected animals removal alone are usually not effective [16,17]. LSDV and SPPV attenuated strains are used as vaccine strains in infected areas in the control of LSD. I case of vaccination, there is possibility of mild or systemic post-vaccination reactions in vaccinated animals. So, the application of diagnostic procedures that will rapidly and specifically differentiate LSDV field strains from LSD vaccine virus strains are extremely important [6].

Because of the disease’s widespread prevalence in Ethiopia, exporting live cattle and their products is a major challenge. Furthermore, the decline in milk and meat production, as well as the low quality of skin and hides, has a detrimental problem on national economic growth [5]. Since the country has no a welldesigned control strategy for this disease it is continuing to be a great problem. Even if the animal health authorities undertake vaccination campaigns when outbreak is reported, researches have shown that the different vaccines used in Ethiopia are not fully effective [18,19]. In addition, the lack of genetic information on in-field circulating virus and their association to the vaccine in use which is important for better matching of vaccines is also a major problem in the country [5]. Therefore, the objective of the study was to isolate and detect the virus responsible for the LSD occurrence in Yayo district using molecular techniques.

Materials and Methods

Description of the study area

The study was carried out in two selected Peasant associations (PA’s) (Shono and Bacho) of Yayo districts located approximately at 564 kilometers West to Addis Ababa in Illubabor zone of Oromia Regional State, Ethiopia (Figure 1). Yayo is located at latitude of 8o 26` 8`` N and longitude of 36o 20` 97`` E. The average rainfall Yayo is 1,200-2,800 mm which extends from February to November in normal years. The district has a land area of approximately 84,626 hectares and an elevation of 1400-2010 meters above sea level. The annual minimum and maximum temperature of Yayo is 18oC and 27oC. The domestic animals reared in Yayo district are 60,202 cattle, 38,386 poultry, 9,925 equines, 30120 sheep, and 35,120 goats. According to Yayo Woreda Agricultural Office, both livestock rearing and crop production are the main source of income of the majority of communities (about 87%) [2,20].